Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023702.1 Corchorus olitorius cultivar O-4 contig23735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26642

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
270--317
21
2.2
21
85
3
60
14
0
27
58
1.37
2561--2590
15
2.1
15
93
6
53
66
0
0
33
0.92
5013--5048
2
18.0
2
100
0
72
50
0
0
50
1.00
5560--5599
21
1.9
21
100
0
80
7
37
5
50
1.53
5600--5626
14
1.9
14
100
0
54
14
3
29
51
1.60
5991--6016
2
13.0
2
100
0
52
50
0
0
50
1.00
6742--6771
2
15.0
2
92
0
51
46
0
0
53
1.00
9080--9172
46
2.0
46
93
0
159
33
2
21
43
1.65
12558--12589
2
17.0
2
87
12
50
50
0
0
50
1.00
12857--13057
29
7.1
29
88
4
277
16
19
24
38
1.92
12857--13055
56
3.5
56
87
4
283
17
20
24
38
1.93
12857--13049
85
2.3
86
86
5
268
17
20
25
36
1.94
20734--20777
19
2.3
19
92
0
70
15
29
36
18
1.92

Tables:   1

The End!