Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023704.1 Corchorus olitorius cultivar O-4 contig23737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32529

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8193--8271
37
2.1
36
88
4
113
29
16
17
36
1.92
8231--8291
29
2.1
29
90
6
97
27
18
21
32
1.96
15926--15993
25
2.7
25
97
0
127
14
27
16
41
1.87
20025--20059
13
2.6
14
90
4
54
22
0
8
68
1.16
24108--24134
2
13.5
2
100
0
54
0
48
0
51
1.00
25294--25436
75
1.9
75
97
0
268
34
11
25
28
1.90
26163--26439
72
3.8
72
77
7
269
29
13
11
44
1.80
26166--26439
144
1.9
144
88
3
417
30
13
12
44
1.80
26163--26432
71
3.8
71
80
3
308
30
14
11
44
1.80
29700--29756
22
2.6
22
80
0
60
42
22
5
29
1.76
29762--30431
131
5.1
131
87
1
826
38
13
14
33
1.85
32424--32448
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!