Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023709.1 Corchorus olitorius cultivar O-4 contig23742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10470

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
768--862
27
3.6
27
85
8
149
46
23
13
16
1.83
1244--1345
38
2.6
39
84
3
134
44
12
19
23
1.85
1318--2360
30
34.4
30
85
4
1261
48
19
13
18
1.80
2224--2359
67
2.0
68
81
4
159
49
18
14
17
1.80
2466--2502
18
2.0
19
89
5
58
40
13
10
35
1.80
2673--2963
69
4.2
67
85
3
341
29
16
26
27
1.97
7602--7631
10
3.0
10
100
0
60
10
40
10
40
1.72
8718--9094
36
10.6
36
78
5
345
41
18
20
20
1.91
8716--9094
107
3.5
106
80
4
350
40
18
20
20
1.91
8718--9094
144
2.6
143
80
5
397
41
18
20
20
1.91

Tables:   1

The End!