Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023711.1 Corchorus olitorius cultivar O-4 contig23744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3968

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3129--3224
35
2.6
35
75
20
88
4
19
0
76
0.95
3136--3226
6
15.7
6
75
16
61
3
19
0
76
0.92
3153--3227
5
13.8
5
77
18
71
1
21
0
77
0.85
3153--3227
23
3.4
22
85
8
100
1
21
0
77
0.85
3263--3319
25
2.2
26
82
14
66
8
43
38
8
1.67
3352--3394
3
14.0
3
85
9
52
0
32
0
67
0.91

Tables:   1

The End!