Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023713.1 Corchorus olitorius cultivar O-4 contig23746, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13570

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3093--3163
17
4.1
17
77
13
65
1
21
0
77
0.85
3103--3155
10
4.8
10
78
17
52
0
18
0
81
0.70
3093--3155
6
10.7
6
79
17
62
1
19
0
79
0.82
3086--3156
23
3.0
23
87
8
90
2
19
0
77
0.89
3299--3340
3
14.0
3
85
9
59
0
33
0
66
0.92
3298--3335
19
2.1
18
95
5
67
0
28
0
71
0.87
9303--9372
5
12.3
6
74
19
62
0
20
0
80
0.72
9303--9354
11
4.8
10
84
15
68
0
15
0
84
0.62
9320--9373
5
10.0
5
81
15
63
0
22
0
77
0.76
9286--9369
39
2.2
39
80
8
91
2
21
0
76
0.90
9303--9372
34
2.1
34
86
10
99
0
20
0
80
0.72
9325--9381
18
3.3
18
85
7
82
0
24
0
75
0.80

Tables:   1

The End!