Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023715.1 Corchorus olitorius cultivar O-4 contig23748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22644

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
320--354
16
2.2
16
94
0
61
45
0
2
51
1.16
2851--2963
27
4.2
27
88
0
163
44
24
10
20
1.83
9098--9142
21
2.0
23
87
12
67
44
4
13
37
1.64
16786--16821
19
1.9
18
88
5
54
41
2
22
33
1.68
19862--19897
16
2.2
16
90
0
54
25
22
33
19
1.97
22134--22283
29
5.1
29
77
1
147
16
18
23
42
1.89
22134--22283
58
2.6
59
88
2
214
16
18
23
42
1.89

Tables:   1

The End!