Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023717.1 Corchorus olitorius cultivar O-4 contig23750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9378

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
973--1027
28
2.0
28
92
0
92
18
16
12
52
1.74
2237--2266
12
2.4
13
94
5
53
26
0
10
63
1.26
6527--6604
35
2.2
36
88
6
115
60
11
17
10
1.58
6619--6668
25
2.0
25
100
0
100
28
16
40
16
1.89
7486--7634
58
2.5
59
88
4
221
23
14
18
43
1.87
7877--8013
58
2.3
59
87
1
195
18
19
22
39
1.92
7877--8013
29
4.7
29
83
0
175
18
19
22
39
1.92

Tables:   1

The End!