Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023725.1 Corchorus olitorius cultivar O-4 contig23758, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59905

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2218--2315
33
3.0
33
93
0
169
24
24
24
26
2.00
3172--3216
21
2.1
21
87
0
63
15
20
31
33
1.93
4598--4627
14
2.1
15
93
6
53
63
6
16
13
1.50
8572--8619
7
6.9
7
82
0
60
62
0
6
31
1.20
8574--8619
14
3.3
14
96
0
83
60
0
6
32
1.22
19858--19887
15
2.0
15
93
0
51
13
16
0
70
1.18
25331--25384
19
2.6
21
77
19
60
38
3
18
38
1.69
35760--35854
41
2.3
41
83
7
113
47
14
14
23
1.81
40104--40178
27
2.8
27
77
0
96
36
28
17
18
1.94
42031--42064
11
2.9
12
86
8
52
32
11
17
38
1.86
58744--58844
54
1.9
53
86
9
145
41
16
8
32
1.80
59495--59580
45
2.0
43
90
6
138
38
23
6
31
1.81

Tables:   1

The End!