Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023728.1 Corchorus olitorius cultivar O-4 contig23761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7746

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1593--1622
15
2.1
15
93
6
53
63
6
16
13
1.50
1980--2027
21
2.3
21
85
0
60
14
25
43
16
1.86
5151--5233
32
2.8
30
82
12
93
39
13
8
38
1.75
5140--5233
33
3.2
28
75
16
91
44
11
8
35
1.71
5243--5297
26
2.0
26
82
6
65
45
16
7
30
1.74
5643--5684
15
2.7
15
92
3
66
64
14
7
14
1.48

Tables:   1

The End!