Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023730.1 Corchorus olitorius cultivar O-4 contig23763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29513

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
955--1049
41
2.3
41
83
0
136
25
16
13
44
1.85
4912--4951
15
2.6
16
92
4
64
15
7
10
67
1.41
6158--6197
15
2.6
16
96
4
73
67
12
7
12
1.41
13584--13613
15
2.0
15
100
0
60
13
6
13
66
1.43
17716--17892
87
2.0
87
97
0
336
22
23
16
37
1.94
21866--22075
34
5.8
35
80
10
176
37
18
14
29
1.91
26415--27001
36
16.5
36
73
10
238
38
24
20
17
1.93
26415--27153
35
20.9
35
77
5
554
38
23
19
17
1.93
28463--28505
7
6.6
7
86
7
56
20
16
0
62
1.32
28813--28845
14
2.4
14
90
5
50
30
9
15
45
1.77

Tables:   1

The End!