Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023748.1 Corchorus olitorius cultivar O-4 contig23781, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32354

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12816--12868
23
2.4
22
81
6
61
35
13
30
20
1.91
15015--15117
28
3.7
28
82
2
118
20
15
27
36
1.93
21022--21068
22
2.1
22
84
7
60
61
2
12
23
1.42
20945--21129
93
2.0
91
84
6
239
51
2
12
33
1.54
26127--26157
15
2.1
15
100
0
62
32
6
16
45
1.72
32158--32182
12
2.1
12
100
0
50
40
16
20
24
1.91
32272--32350
10
8.5
10
73
18
55
44
0
1
54
1.08
32278--32350
7
10.3
7
72
19
53
45
0
1
53
1.09
32271--32308
18
2.1
18
85
9
51
39
0
0
60
0.97
32276--32333
22
2.6
21
79
15
64
39
0
1
58
1.08

Tables:   1

The End!