Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023750.1 Corchorus olitorius cultivar O-4 contig23783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8144

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
387--416
5
6.2
5
96
3
53
0
16
0
83
0.65
2007--2053
21
2.2
22
80
7
60
23
17
23
36
1.95
2184--2234
26
2.0
26
100
0
102
54
9
19
15
1.68
2441--2516
33
2.3
33
100
0
152
46
2
43
7
1.47
5258--5573
163
1.9
162
85
4
431
30
17
20
31
1.96
5193--5595
162
2.5
162
79
6
424
29
19
20
29
1.97
6949--6984
16
2.2
16
95
0
63
11
16
16
55
1.68
7693--7871
69
2.7
68
83
7
199
18
24
11
45
1.82

Tables:   1

The End!