Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023754.1 Corchorus olitorius cultivar O-4 contig23787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19699

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--938
15
2.7
15
92
3
66
11
9
14
64
1.50
11507--11532
13
2.0
13
100
0
52
53
23
15
7
1.67
14072--14668
39
14.3
39
77
12
503
17
27
19
35
1.95
14072--14649
166
3.4
167
81
9
644
17
27
19
34
1.95
14113--14649
253
2.1
252
90
2
846
17
27
19
35
1.95
15465--15877
207
2.0
203
90
1
646
45
13
14
25
1.82
17885--17917
15
2.1
16
88
5
50
63
0
3
33
1.10
17885--17917
8
4.2
8
84
7
50
63
0
3
33
1.10
19026--19086
2
32.5
2
74
12
58
47
0
0
52
1.00
19026--19133
12
8.8
13
70
16
63
50
3
0
45
1.19

Tables:   1

The End!