Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023756.1 Corchorus olitorius cultivar O-4 contig23789, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23687

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6220--6256
15
2.4
16
90
4
58
64
10
8
16
1.47
9549--9598
21
2.4
21
93
0
82
18
24
42
16
1.89
12866--12904
19
2.1
19
95
0
69
23
12
10
53
1.69
13305--13344
15
2.6
16
92
4
64
65
12
7
15
1.47
14731--14769
20
2.1
18
86
13
53
38
20
5
35
1.75
14722--14781
29
2.0
30
83
6
77
36
18
8
36
1.81
16434--16511
31
2.5
31
91
4
122
23
23
19
34
1.96
19476--19563
43
2.1
43
95
2
160
21
19
18
40
1.91
19644--19742
31
3.3
30
84
5
137
34
20
23
22
1.97
21975--22000
13
2.0
13
100
0
52
53
30
0
15
1.42

Tables:   1

The End!