Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023757.1 Corchorus olitorius cultivar O-4 contig23790, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14003

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2353--2435
3
27.7
3
100
0
166
33
0
0
66
0.92
4022--4061
15
2.6
16
88
4
55
62
12
10
15
1.54
11038--11111
28
2.6
28
95
4
130
39
5
24
31
1.78
11063--11113
17
3.4
17
65
30
51
37
3
23
35
1.74
12493--12532
15
2.6
16
92
4
64
15
7
10
67
1.41
12774--12860
31
3.0
30
79
15
85
42
11
6
39
1.68
12771--12860
30
3.0
32
80
16
97
41
12
6
40
1.69
12834--12903
32
2.1
34
84
7
90
31
5
15
47
1.69
12869--12942
26
2.7
27
77
10
80
36
12
13
37
1.82

Tables:   1

The End!