Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023762.1 Corchorus olitorius cultivar O-4 contig23795, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14517

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2206--2256
24
2.1
25
88
3
77
72
3
5
17
1.20
2684--2736
28
1.9
28
85
11
74
62
11
5
20
1.49
4013--4077
33
2.0
33
96
0
121
30
27
18
23
1.97
8446--8491
22
2.1
21
88
4
65
63
13
6
17
1.50
9524--9584
30
2.1
30
84
9
81
27
13
13
45
1.80
9528--9592
30
2.2
29
78
8
69
33
15
9
41
1.79
13331--13360
2
15.0
2
100
0
60
50
0
0
50
1.00
13514--13565
25
2.2
23
80
10
59
73
7
5
13
1.24
13521--13574
21
2.5
21
81
3
63
74
5
3
16
1.16
14003--14043
20
2.0
20
86
9
57
65
9
2
21
1.34

Tables:   1

The End!