Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023764.1 Corchorus olitorius cultivar O-4 contig23797, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51065

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1178--1221
7
6.4
7
94
5
81
56
13
0
29
1.38
1178--1218
20
2.0
20
100
0
82
56
14
0
29
1.39
1174--1249
27
2.8
28
82
15
97
53
9
0
36
1.33
3112--3227
24
4.8
24
92
1
169
10
25
42
21
1.85
13031--13110
32
2.5
32
93
0
142
60
16
3
20
1.51
25284--25317
13
2.7
12
90
9
50
17
0
23
58
1.38
35087--35187
51
2.0
51
82
7
125
22
22
13
40
1.90
40793--40834
11
4.1
11
79
17
54
61
0
0
38
0.96

Tables:   1

The End!