Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023765.1 Corchorus olitorius cultivar O-4 contig23798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24449

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
551--597
14
3.3
14
77
14
51
29
0
2
68
1.02
14473--14558
30
2.9
30
91
0
136
23
26
6
43
1.79
17326--17391
33
2.0
33
87
0
96
24
33
31
10
1.89
18485--18561
30
2.5
31
85
2
102
25
29
16
27
1.97
20827--20980
77
2.0
79
90
2
249
50
0
13
35
1.47
21559--21593
18
1.9
18
94
0
61
51
11
8
28
1.67
21632--21673
15
3.1
14
87
12
61
50
0
0
50
1.00
21725--21756
16
2.0
16
93
0
55
46
0
0
53
1.00
21725--21772
18
2.5
19
83
10
62
52
0
0
47
1.00
21798--21905
35
3.1
35
98
0
207
41
19
16
22
1.90
22516--22551
9
4.1
9
89
3
56
47
0
19
33
1.50
23828--23969
49
3.0
47
82
9
178
27
16
5
50
1.67

Tables:   1

The End!