Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01002377.1 Corchorus olitorius cultivar O-4 contig02377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3739

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1209--1276
12
5.6
12
91
3
100
35
14
22
27
1.93
1623--1691
34
2.1
33
88
2
102
43
13
11
31
1.79
1613--1684
17
4.2
17
75
7
74
44
16
11
27
1.82
2212--2238
10
2.7
10
100
0
54
48
11
11
29
1.73
3492--3539
2
24.0
2
95
0
87
47
0
2
50
1.12

Tables:   1

The End!