Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023782.1 Corchorus olitorius cultivar O-4 contig23815, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48562

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4720--4779
29
2.0
30
87
6
86
38
8
18
35
1.81
11543--11602
29
2.0
31
87
6
88
38
6
18
36
1.77
12183--12218
18
2.0
18
100
0
72
11
11
11
66
1.45
21284--21535
131
1.9
131
94
1
443
25
11
21
40
1.87
22318--22388
29
2.4
30
90
2
108
46
18
18
16
1.84
23311--23335
13
1.9
13
100
0
50
28
0
0
72
0.86
23961--24013
3
17.7
3
100
0
106
32
0
0
67
0.91
24036--24200
88
1.9
87
81
3
197
35
10
13
41
1.78
26835--26907
29
2.5
29
86
6
103
35
21
9
32
1.86
27025--27080
29
1.9
29
85
0
76
37
10
21
30
1.87
31008--31046
2
19.5
2
94
0
69
46
0
2
51
1.14
31012--31050
12
3.2
12
96
0
69
43
0
5
51
1.24
37947--37983
2
19.0
2
94
5
67
48
0
0
51
1.00

Tables:   1

The End!