Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023788.1 Corchorus olitorius cultivar O-4 contig23821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12572

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
920--999
29
2.7
29
84
1
97
16
15
28
40
1.88
1617--1666
22
2.3
22
96
0
91
20
42
8
30
1.80
8720--9195
36
13.9
35
76
10
342
19
21
19
39
1.92
8827--8876
26
1.9
26
88
8
75
16
20
26
38
1.92
8848--9195
141
2.5
136
83
6
457
19
20
19
40
1.91
9539--9846
30
10.2
30
90
1
440
21
13
17
48
1.81
9539--9843
91
3.4
90
88
3
443
20
13
17
47
1.81
9559--9879
30
10.6
30
84
8
135
21
13
18
46
1.83
10360--10436
29
2.6
29
83
2
91
15
15
27
41
1.87

Tables:   1

The End!