Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023793.1 Corchorus olitorius cultivar O-4 contig23826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20105

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5220--5255
2
18.0
2
88
0
54
47
5
47
0
1.25
7369--7402
16
2.1
16
94
0
59
5
14
38
41
1.70
7874--7930
27
2.1
27
93
0
96
36
3
22
36
1.72
8038--8131
45
2.2
43
84
7
120
40
21
3
35
1.69
9303--9354
19
2.7
19
91
5
79
28
46
17
7
1.75
11141--11186
22
2.0
24
87
8
69
28
17
26
28
1.98
17928--18061
72
1.9
72
90
0
214
32
20
25
21
1.97

Tables:   1

The End!