Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023797.1 Corchorus olitorius cultivar O-4 contig23830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16742

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2827--2930
52
2.0
52
98
0
199
29
19
25
25
1.98
2888--3047
77
2.1
77
96
0
293
29
14
20
35
1.92
6056--6184
41
3.2
40
82
6
154
21
39
16
22
1.92
6145--6177
13
2.5
13
95
0
57
18
45
15
21
1.85
10323--10351
10
3.0
10
95
5
51
31
0
17
51
1.45
13132--14089
482
2.0
478
96
1
1785
38
15
16
29
1.90
14884--14953
30
2.3
31
76
11
83
27
4
7
61
1.41
15410--15452
16
2.7
16
85
7
61
41
37
16
4
1.69
15871--15917
3
15.7
3
95
0
85
0
34
2
63
1.06
16214--16296
27
3.0
28
85
3
105
16
16
24
42
1.89

Tables:   1

The End!