Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023805.1 Corchorus olitorius cultivar O-4 contig23838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18157

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
349--373
9
2.8
9
100
0
50
12
48
20
20
1.80
719--766
21
2.3
21
85
7
62
16
43
25
14
1.86
1124--1153
15
2.1
14
93
6
51
13
16
6
63
1.50
3980--4023
17
2.7
15
80
16
52
11
9
13
65
1.46
10986--11032
22
2.1
23
96
4
87
46
12
19
21
1.82
16908--16940
17
2.0
17
88
5
50
42
0
12
45
1.41
17185--17512
41
7.8
42
81
8
366
41
25
11
21
1.86
17185--17512
84
3.9
84
91
2
516
41
25
11
21
1.86

Tables:   1

The End!