Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023820.1 Corchorus olitorius cultivar O-4 contig23853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8238

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
984--1053
36
1.9
36
88
0
104
22
10
7
60
1.53
1567--1978
204
2.0
203
95
1
745
43
8
10
37
1.69
2049--2095
25
1.9
24
95
4
85
55
8
6
29
1.55
2086--2166
39
2.0
40
92
2
137
37
3
8
50
1.51
2382--2424
2
21.0
2
90
4
68
48
0
4
46
1.22
4838--4938
50
2.0
50
100
0
202
35
17
15
30
1.92
8161--8185
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!