Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023826.1 Corchorus olitorius cultivar O-4 contig23859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21507

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
343--399
6
9.0
6
76
17
53
8
17
0
73
1.07
343--396
12
4.2
13
84
13
67
9
16
0
74
1.07
343--396
20
2.8
19
78
18
58
9
16
0
74
1.07
343--400
26
2.3
27
85
8
77
8
18
0
72
1.10
17755--17851
47
2.1
47
92
1
160
25
13
5
55
1.58
18120--18146
1
27.0
1
100
0
54
100
0
0
0
0.00
19462--19505
19
2.3
19
88
0
70
20
13
20
45
1.85
19948--20008
18
3.3
18
66
11
52
21
11
27
39
1.88
19935--20003
36
1.9
36
91
5
113
20
10
27
42
1.84

Tables:   1

The End!