Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023829.1 Corchorus olitorius cultivar O-4 contig23862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31508

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--2274
333
6.8
326
79
7
1989
36
14
14
34
1.88
3--2272
670
3.4
657
80
7
2115
36
14
14
34
1.88
2637--2666
15
1.9
16
93
6
53
53
3
0
43
1.17
2912--2960
8
5.9
8
83
9
62
53
0
22
24
1.47
2908--2961
16
3.2
16
87
10
81
55
0
20
24
1.43
12724--12785
30
2.0
31
96
3
117
35
16
9
38
1.81
13829--13952
44
2.8
44
75
7
142
28
16
6
48
1.71
14594--14651
27
2.1
27
81
6
64
24
6
12
56
1.59
30606--30648
20
2.1
21
91
4
70
46
6
2
44
1.43
30632--30711
31
2.5
34
76
19
98
46
6
1
46
1.36

Tables:   1

The End!