Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023834.1 Corchorus olitorius cultivar O-4 contig23867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29215

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7293--7336
21
2.1
21
91
0
70
4
29
9
56
1.50
7786--7905
36
3.2
36
75
8
116
8
23
19
49
1.75
12849--12920
26
2.6
28
84
8
103
59
6
0
33
1.24
12963--13070
53
2.0
53
98
0
207
40
19
19
20
1.91
13092--13175
41
2.0
41
100
0
168
40
38
7
14
1.73
13555--13606
26
2.0
27
96
3
97
69
3
3
23
1.22
15962--16032
24
3.0
24
87
0
97
59
12
18
9
1.60

Tables:   1

The End!