Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023836.1 Corchorus olitorius cultivar O-4 contig23869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10604

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--1818
334
4.2
319
81
8
1402
35
16
14
33
1.89
2456--2902
239
1.9
239
88
0
671
38
15
11
33
1.84
3033--3066
17
2.0
17
100
0
68
11
17
35
35
1.87
5522--6794
337
4.0
314
80
7
1176
36
16
13
33
1.88
5468--6819
635
2.1
648
82
6
1631
36
16
13
33
1.89
5829--8427
337
8.0
326
68
15
1117
36
17
13
33
1.89
7074--8427
333
4.1
331
81
6
1589
36
16
13
33
1.88
8681--9300
340
1.8
337
88
1
945
37
15
12
34
1.86
9611--10572
329
2.9
330
88
5
1405
35
16
14
33
1.89

Tables:   1

The End!