Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023841.1 Corchorus olitorius cultivar O-4 contig23874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36831

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10801--11005
101
2.0
100
90
3
322
29
11
20
39
1.87
10997--11191
101
1.9
101
87
0
282
27
24
14
32
1.95
11834--11875
22
1.9
22
100
0
84
33
19
4
42
1.72
11835--11883
22
2.2
22
92
0
80
28
16
8
46
1.75
12141--12186
22
2.1
22
100
0
92
65
8
13
13
1.48
21980--22028
25
2.0
25
100
0
98
51
0
24
24
1.49
22681--22752
3
24.0
3
100
0
144
33
0
0
66
0.92
23695--23738
22
2.0
21
86
4
61
0
13
2
84
0.73
36699--36827
57
2.3
57
86
0
168
24
14
33
27
1.94

Tables:   1

The End!