Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023842.1 Corchorus olitorius cultivar O-4 contig23875, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30726

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1781--1820
21
2.1
19
86
13
55
20
27
15
37
1.92
8057--8083
7
3.9
7
100
0
54
14
59
11
14
1.62
13972--14015
21
2.0
22
95
4
81
31
18
6
43
1.76
19237--19300
31
2.1
29
85
5
83
42
17
9
31
1.81
28665--28691
4
6.8
4
100
0
54
22
0
0
77
0.76
29126--29203
41
1.9
41
92
2
131
26
15
12
44
1.82
29202--29290
45
2.0
45
95
0
160
22
19
10
48
1.78
29597--29703
52
2.1
52
98
0
205
43
14
15
25
1.85

Tables:   1

The End!