Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023846.1 Corchorus olitorius cultivar O-4 contig23879, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9164

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--1132
325
3.3
320
83
5
1358
31
15
16
36
1.90
1537--2050
262
2.0
259
93
1
886
31
16
14
37
1.88
2266--2436
89
1.9
89
84
2
225
42
9
17
30
1.81
1935--2703
422
1.8
417
85
5
1073
34
14
15
35
1.89
2550--3173
321
1.9
321
82
6
773
32
14
17
36
1.90
4027--4150
62
2.1
58
87
6
176
41
25
8
25
1.82
4311--5015
327
2.1
328
83
5
872
32
13
15
38
1.86
9030--9164
38
3.6
38
89
2
191
31
22
14
31
1.94

Tables:   1

The End!