Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023853.1 Corchorus olitorius cultivar O-4 contig23886, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10127

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1062--4091
333
9.2
332
79
6
2780
36
15
14
33
1.88
4422--4451
15
1.9
16
93
6
53
56
0
0
43
0.99
4411--4476
35
1.9
34
84
9
89
56
0
3
40
1.15
8314--8338
2
12.5
2
100
0
50
52
0
0
48
1.00
8884--8927
20
2.2
20
100
0
88
34
4
9
52
1.54
9239--9461
111
2.0
111
98
0
428
35
17
12
34
1.87
9757--9805
25
2.0
24
84
4
62
38
0
28
32
1.57

Tables:   1

The End!