Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023855.1 Corchorus olitorius cultivar O-4 contig23888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15237

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5290--5334
22
2.0
22
100
0
90
37
26
8
26
1.86
5293--5341
22
2.4
20
90
10
73
40
24
8
26
1.83
5797--5836
20
2.0
20
95
0
71
27
25
7
40
1.82
10435--10470
2
18.5
2
94
5
65
50
0
0
50
1.00
10871--10921
18
2.8
18
96
0
93
37
3
39
19
1.70
11657--11716
2
32.5
2
76
15
58
50
1
0
48
1.11
12757--13070
22
14.4
22
67
3
114
37
12
16
33
1.86

Tables:   1

The End!