Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023861.1 Corchorus olitorius cultivar O-4 contig23894, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3709

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
22--3705
320
11.5
320
75
9
2978
36
15
16
31
1.90
20--2773
642
4.3
639
84
6
3160
36
15
16
31
1.90
20--3705
968
3.8
946
76
10
2838
36
15
16
31
1.90
995--3705
318
8.5
316
75
9
2188
36
16
15
31
1.90

Tables:   1

The End!