Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023863.1 Corchorus olitorius cultivar O-4 contig23896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19302

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3403--3428
6
4.3
6
100
0
52
0
15
15
69
1.20
5405--5434
3
10.0
3
100
0
60
0
33
0
66
0.92
7055--7406
165
2.1
167
93
1
591
30
23
19
26
1.98
18413--18488
30
2.6
29
93
6
134
38
1
17
43
1.57
18676--18728
27
2.1
26
86
10
74
50
9
5
33
1.58
18694--18740
25
1.9
24
82
4
58
51
12
2
34
1.52

Tables:   1

The End!