Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023867.1 Corchorus olitorius cultivar O-4 contig23900, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65259

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--43
2
21.0
2
100
0
84
50
0
0
50
1.00
6217--6267
17
3.1
16
86
8
66
35
21
21
21
1.96
23561--23585
9
2.8
9
100
0
50
0
44
0
56
0.99
37986--38033
7
6.7
7
83
4
60
58
2
0
39
1.10
37978--38033
21
2.7
21
86
8
71
58
1
0
39
1.08
37978--38048
18
3.7
19
78
10
81
61
1
0
36
1.05
61159--61197
3
13.0
3
83
0
51
28
2
2
66
1.18
65222--65259
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!