Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023878.1 Corchorus olitorius cultivar O-4 contig23911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72037

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14389--14413
13
1.9
13
100
0
50
28
0
0
72
0.86
34875--34961
31
2.8
31
75
6
95
35
29
20
13
1.92
35022--35055
15
2.3
15
94
0
59
29
23
23
23
1.99
35980--36014
11
3.2
11
83
0
52
77
17
5
0
0.96
53430--53513
37
2.3
37
93
0
150
13
11
20
54
1.69
63791--63827
19
1.9
19
94
0
65
16
35
13
35
1.88
63878--63935
19
2.9
21
74
10
66
34
18
10
36
1.85
64307--65865
333
4.7
335
82
6
1742
35
16
14
33
1.89
67169--68222
332
3.2
330
84
3
1208
35
17
15
31
1.91
69014--70027
331
3.0
328
80
6
1071
34
15
15
34
1.89
70208--71769
331
4.7
332
85
3
2142
33
14
14
37
1.87
70208--71769
663
2.4
662
86
3
2180
33
14
14
37
1.87

Tables:   1

The End!