Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023880.1 Corchorus olitorius cultivar O-4 contig23913, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5251

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--1752
332
3.6
331
83
5
1539
32
15
17
34
1.91
1204--2307
550
2.0
548
87
1
1604
31
15
17
35
1.91
874--2606
882
2.0
880
86
3
2469
32
15
17
35
1.91
1754--3973
335
6.5
335
84
6
2762
32
14
18
35
1.91
3979--5250
331
3.9
328
82
4
1467
34
14
14
37
1.86

Tables:   1

The End!