Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023890.1 Corchorus olitorius cultivar O-4 contig23923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14294

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
440--3638
154
20.7
154
88
2
4324
40
18
18
22
1.91
5--3638
462
7.9
462
86
3
4784
40
18
18
22
1.91
7395--7429
18
1.9
18
88
11
54
14
22
22
40
1.90
9504--9538
12
2.9
12
100
0
70
77
0
8
14
0.99
14036--14080
21
2.1
21
87
0
63
15
24
31
28
1.96

Tables:   1

The End!