Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023891.1 Corchorus olitorius cultivar O-4 contig23924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10298

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
931--970
21
1.9
21
94
0
71
22
22
22
32
1.98
2803--2887
31
2.8
30
87
1
116
56
4
16
22
1.58
3477--3528
8
6.4
8
84
10
52
80
0
17
1
0.80
4931--5443
169
3.0
169
93
0
864
28
20
17
33
1.95
5386--5488
45
2.3
45
98
0
197
27
21
23
28
1.99
5217--5657
214
2.1
214
91
0
702
28
21
18
32
1.96
5431--5964
169
3.2
168
84
1
687
28
19
16
35
1.94
5048--5796
383
2.0
383
92
0
1246
29
20
16
33
1.95
6037--6102
33
2.0
33
87
0
96
21
16
16
45
1.85
6118--6220
30
3.4
30
80
2
116
24
14
17
43
1.86
6099--6225
60
2.1
61
83
5
159
23
13
16
46
1.82
6278--6366
39
2.3
39
90
0
133
20
15
16
47
1.83
6694--6764
28
2.6
27
90
2
115
18
16
25
39
1.91
9339--9426
27
3.2
27
86
1
95
22
15
21
39
1.91
9354--9426
27
2.7
27
91
0
110
20
15
26
38
1.92

Tables:   1

The End!