Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023904.1 Corchorus olitorius cultivar O-4 contig23937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5568

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
71--318
43
5.8
43
86
0
318
19
24
18
37
1.94
71--318
85
2.9
86
84
3
338
19
24
18
37
1.94
27--317
128
2.2
129
82
7
358
19
25
18
36
1.94
340--542
41
5.0
41
90
1
320
19
24
19
36
1.94
333--544
40
5.2
40
89
2
325
19
24
19
37
1.94
339--542
81
2.5
81
89
2
320
19
24
19
36
1.95
3626--3666
21
2.0
21
90
9
66
34
9
24
31
1.88
4041--4093
23
2.2
24
96
3
99
49
18
15
16
1.80

Tables:   1

The End!