Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023907.1 Corchorus olitorius cultivar O-4 contig23940, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27883

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10824--11014
95
2.0
95
97
0
364
26
19
24
28
1.99
12163--12218
15
3.8
15
70
11
53
10
5
8
75
1.19
13968--14313
93
3.8
93
81
4
346
32
6
14
46
1.70
13950--14313
94
3.9
91
81
4
381
32
6
14
46
1.70
20914--20948
18
2.0
18
88
5
54
25
11
11
51
1.71
24925--24959
16
2.1
17
94
5
63
80
11
2
5
1.00
25100--25169
28
2.5
28
76
15
72
35
15
2
45
1.61
25517--25556
15
2.6
16
88
4
55
62
12
10
15
1.54

Tables:   1

The End!