Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023918.1 Corchorus olitorius cultivar O-4 contig23951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21828

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2700--2774
27
2.8
25
86
10
87
21
10
28
40
1.86
2986--3054
34
2.0
34
97
0
129
23
14
13
49
1.78
6998--7033
18
2.1
18
89
5
56
47
5
11
36
1.63
7891--7926
19
1.9
18
88
5
54
41
8
22
27
1.82
11870--11895
11
2.4
11
100
0
52
11
42
7
38
1.70
18048--18398
119
2.9
119
88
2
454
40
8
11
40
1.71
19499--19624
44
2.9
44
96
0
225
39
7
11
40
1.71
19499--19625
22
5.8
22
78
7
150
40
7
11
40
1.71

Tables:   1

The End!