Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023939.1 Corchorus olitorius cultivar O-4 contig23972, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5946

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4373--4784
115
3.6
116
93
1
709
26
15
15
42
1.86
4373--4784
58
7.1
58
93
1
693
26
15
15
42
1.86
4690--5010
98
3.1
98
85
8
390
25
14
16
42
1.87
4748--4836
40
2.2
40
93
0
151
26
14
16
41
1.87
4633--4939
156
2.0
155
94
0
542
25
14
16
43
1.86
4575--5010
214
2.0
213
93
0
737
25
15
16
42
1.87
4788--5014
58
3.9
58
92
0
373
25
15
15
43
1.86
5285--5656
29
12.8
29
78
5
313
21
18
21
38
1.93
5281--5656
57
6.5
57
75
7
330
21
18
21
38
1.93
5281--5658
115
3.3
115
80
6
372
21
18
20
38
1.93
5288--5656
144
2.5
143
88
3
540
21
18
20
39
1.93

Tables:   1

The End!