Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023943.1 Corchorus olitorius cultivar O-4 contig23976, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6405

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1464--1668
69
2.9
69
83
7
263
26
24
20
28
1.99
1506--2020
35
14.7
35
82
7
527
27
21
20
30
1.98
2038--2332
105
2.8
105
90
0
446
28
16
28
26
1.97
3145--3244
33
3.0
33
95
0
173
29
11
19
41
1.85
3558--3582
8
3.1
8
100
0
50
12
12
0
76
1.04
4798--4845
19
2.5
20
76
10
55
29
14
10
45
1.78

Tables:   1

The End!