Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023950.1 Corchorus olitorius cultivar O-4 contig23983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22919

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7735--7843
40
2.6
43
84
5
125
33
11
19
35
1.87
7712--8611
22
39.3
22
66
13
219
36
10
16
36
1.82
8033--8128
43
2.2
44
83
5
124
37
7
15
39
1.75
8403--8616
46
4.8
44
75
6
178
35
7
18
38
1.78
8447--8528
24
3.5
24
75
12
89
30
6
19
43
1.75
9006--9067
22
2.8
22
87
4
81
41
11
11
35
1.77
9012--9076
22
3.0
22
82
8
78
43
9
15
32
1.78
16819--16903
31
2.8
30
78
8
93
38
4
8
48
1.54

Tables:   1

The End!