Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023951.1 Corchorus olitorius cultivar O-4 contig23984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11261

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
387--422
15
2.5
15
90
4
56
41
8
11
38
1.71
387--446
14
4.3
13
87
8
66
41
6
13
38
1.70
1922--2050
67
1.9
67
88
0
195
26
31
15
27
1.96
2109--2261
69
2.2
70
83
3
184
24
28
16
30
1.97
2280--2397
35
3.4
35
91
1
193
27
16
24
31
1.97
3872--4023
76
2.0
76
82
5
182
18
28
28
23
1.98
7846--7880
15
2.2
16
90
5
54
14
5
11
68
1.37

Tables:   1

The End!