Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023984.1 Corchorus olitorius cultivar O-4 contig24017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28163

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--117
3
39.0
3
91
8
193
66
0
0
33
0.92
194--254
27
2.3
25
80
11
59
34
14
13
37
1.85
1231--1260
13
2.3
13
94
0
51
13
6
20
60
1.55
4584--4615
4
8.0
4
100
0
64
75
0
0
25
0.81
11455--11496
12
3.4
12
83
12
50
35
2
7
54
1.41
25499--25560
31
2.0
31
96
0
115
40
6
19
33
1.77
25530--27904
733
3.2
731
86
2
3527
29
14
17
38
1.89
27959--28028
29
2.3
29
78
4
68
25
7
25
41
1.81

Tables:   1

The End!