Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01023986.1 Corchorus olitorius cultivar O-4 contig24019, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40070

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1128--1179
25
2.1
25
100
0
104
38
25
15
21
1.92
8269--8307
2
19.5
2
100
0
78
51
0
0
48
1.00
10488--10543
27
2.1
27
96
0
103
37
37
1
23
1.65
10696--10732
18
1.9
19
89
10
58
8
5
18
67
1.36
12279--12315
15
2.4
16
90
4
58
21
8
0
70
1.13
29213--29240
2
14.0
2
100
0
56
0
50
0
50
1.00
29897--29922
1
26.0
1
100
0
52
0
0
0
100
0.00

Tables:   1

The End!